# Daniel McDonald

**Type:** Researchers  
**Canonical URL:** https://scholariq.org/researchers/daniel-mcdonald/

## Facts

| Field | Value |
| --- | --- |
| Citations | 111,982 |
| Field | Gut microbiota and health |
| h-index | 76 |
| i10-index | 152 |
| Last Known Institution | UC San Diego Health System |
| OpenAlex ID | https://openalex.org/A5022461817 |
| ORCID iD | https://orcid.org/0000-0003-0876-9060 |
| Works | 314 |

## Researcher papers

- [Reproducible, interactive, scalable and extensible microbiome data science using QIIME 2](https://scholariq.org/papers/reproducible-interactive-scalable-and-extensible-microbiome-data-science-using/)
- [Regional variation limits applications of healthy gut microbiome reference ranges and disease models](https://scholariq.org/papers/regional-variation-limits-applications-of-healthy-gut-microbiome-reference/)
- [American Gut: an Open Platform for Citizen Science Microbiome Research](https://scholariq.org/papers/american-gut-an-open-platform-for-citizen-science-microbiome-research/)
- [QIIME 2: Reproducible, interactive, scalable, and extensible microbiome data science](https://scholariq.org/papers/qiime-2-reproducible-interactive-scalable-and-extensible-microbiome-data-science/)
- [Author Correction: Reproducible, interactive, scalable and extensible microbiome data science using QIIME 2](https://scholariq.org/papers/author-correction-reproducible-interactive-scalable-and-extensible-microbiome/)
- [QIIME 2: Reproducible, interactive, scalable, and extensible microbiome data science](https://scholariq.org/papers/qiime-2-reproducible-interactive-scalable-and-extensible-microbiome-data-science-3/)
- [Wastewater sequencing reveals early cryptic SARS-CoV-2 variant transmission](https://scholariq.org/papers/wastewater-sequencing-reveals-early-cryptic-sars-cov-2-variant-transmission/)
- [PyCogent: a toolkit for making sense from sequence](https://scholariq.org/papers/pycogent-a-toolkit-for-making-sense-from-sequence/)

## Researcher topics

- [Gut microbiota and health](https://scholariq.org/topics/gut-microbiota-and-health/)
- [Genomics and Phylogenetic Studies](https://scholariq.org/topics/genomics-and-phylogenetic-studies/)
- [Metabolomics and Mass Spectrometry Studies](https://scholariq.org/topics/metabolomics-and-mass-spectrometry-studies/)
- [Microbial Community Ecology and Physiology](https://scholariq.org/topics/microbial-community-ecology-and-physiology/)
- [Diet and metabolism studies](https://scholariq.org/topics/diet-and-metabolism-studies/)

## Researcher university

- [UC San Diego Health System](https://scholariq.org/institutions/uc-san-diego-health-system/)

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Source: ScholarIQ — public research metadata, principally OpenAlex. See https://scholariq.org/sources/ for provenance and https://scholariq.org/methodology/ for what these figures mean.