# Advanced Proteomics Techniques and Applications

**Type:** Topics  
**Canonical URL:** https://scholariq.org/topics/advanced-proteomics-techniques-and-applications/

## Facts

| Field | Value |
| --- | --- |
| Description | This cluster of papers covers advancements in mass spectrometry techniques, with a focus on proteomics, quantitative analysis, protein identification, phosphoproteomics, and biomarker discovery. It includes topics such as label-free quantification, tandem mass spectrometry, protein phosphorylation, and data-independent acquisition. |
| Domain | Physical Sciences |
| Field | Chemistry |
| OpenAlex ID | t10519 |
| Works | 100 |

## Topic papers all

Showing 15 of 100.

- [MS-DIAL: data-independent MS/MS deconvolution for comprehensive metabolome analysis](https://scholariq.org/papers/ms-dial-data-independent-ms-ms-deconvolution-for-comprehensive-metabolome/)
- [Metabolomics – the link between genotypes and phenotypes](https://scholariq.org/papers/metabolomics-the-link-between-genotypes-and-phenotypes-3/)
- [Use of proteomic patterns in serum to identify ovarian cancer](https://scholariq.org/papers/use-of-proteomic-patterns-in-serum-to-identify-ovarian-cancer/)
- [Mass Spectrometry in Proteomics](https://scholariq.org/papers/mass-spectrometry-in-proteomics/)
- [Integrated Proteogenomic Characterization of Human High-Grade Serous Ovarian Cancer](https://scholariq.org/papers/integrated-proteogenomic-characterization-of-human-high-grade-serous-ovarian/)
- [LipidBlast in silico tandem mass spectrometry database for lipid identification](https://scholariq.org/papers/lipidblast-in-silico-tandem-mass-spectrometry-database-for-lipid-identification/)
- [Connecting genetic risk to disease end points through the human blood plasma proteome](https://scholariq.org/papers/connecting-genetic-risk-to-disease-end-points-through-the-human-blood-plasma/)
- [Integrated Genomic and Proteomic Analyses of Gene Expression in Mammalian Cells](https://scholariq.org/papers/integrated-genomic-and-proteomic-analyses-of-gene-expression-in-mammalian-cells/)
- [Computational prediction of proteotypic peptides for quantitative proteomics](https://scholariq.org/papers/computational-prediction-of-proteotypic-peptides-for-quantitative-proteomics/)
- [Analysis of Binding Reactions by Fluorescence Recovery after Photobleaching](https://scholariq.org/papers/analysis-of-binding-reactions-by-fluorescence-recovery-after-photobleaching/)
- [Steps toward mapping the human vasculature by phage display](https://scholariq.org/papers/steps-toward-mapping-the-human-vasculature-by-phage-display/)
- [MetaboAnalystR 3.0: Toward an Optimized Workflow for Global Metabolomics](https://scholariq.org/papers/metaboanalystr-3-0-toward-an-optimized-workflow-for-global-metabolomics/)
- [Repeatability and Reproducibility in Proteomic Identifications by Liquid Chromatography−Tandem Mass Spectrometry](https://scholariq.org/papers/repeatability-and-reproducibility-in-proteomic-identifications-by-liquid/)
- [Naturally Occurring Human Urinary Peptides for Use in Diagnosis of Chronic Kidney Disease](https://scholariq.org/papers/naturally-occurring-human-urinary-peptides-for-use-in-diagnosis-of-chronic/)
- [The human serum proteome: Display of nearly 3700 chromatographically separated protein spots on two‐dimensional electrophoresis gels and identification of 325 distinct proteins](https://scholariq.org/papers/the-human-serum-proteome-display-of-nearly-3700-chromatographically-separated/)

## Topic primary papers

Showing 15 of 47.

- [Use of proteomic patterns in serum to identify ovarian cancer](https://scholariq.org/papers/use-of-proteomic-patterns-in-serum-to-identify-ovarian-cancer/)
- [Integrated Proteogenomic Characterization of Human High-Grade Serous Ovarian Cancer](https://scholariq.org/papers/integrated-proteogenomic-characterization-of-human-high-grade-serous-ovarian/)
- [Integrated Genomic and Proteomic Analyses of Gene Expression in Mammalian Cells](https://scholariq.org/papers/integrated-genomic-and-proteomic-analyses-of-gene-expression-in-mammalian-cells/)
- [Computational prediction of proteotypic peptides for quantitative proteomics](https://scholariq.org/papers/computational-prediction-of-proteotypic-peptides-for-quantitative-proteomics/)
- [Repeatability and Reproducibility in Proteomic Identifications by Liquid Chromatography−Tandem Mass Spectrometry](https://scholariq.org/papers/repeatability-and-reproducibility-in-proteomic-identifications-by-liquid/)
- [Naturally Occurring Human Urinary Peptides for Use in Diagnosis of Chronic Kidney Disease](https://scholariq.org/papers/naturally-occurring-human-urinary-peptides-for-use-in-diagnosis-of-chronic/)
- [The human serum proteome: Display of nearly 3700 chromatographically separated protein spots on two‐dimensional electrophoresis gels and identification of 325 distinct proteins](https://scholariq.org/papers/the-human-serum-proteome-display-of-nearly-3700-chromatographically-separated/)
- [Improved silver staining protocols for high sensitivity protein identification using matrix-assisted laser desorption/ionization-time of flight analysis](https://scholariq.org/papers/improved-silver-staining-protocols-for-high-sensitivity-protein-identification/)
- [Detecting Differential and Correlated Protein Expression in Label-Free Shotgun Proteomics](https://scholariq.org/papers/detecting-differential-and-correlated-protein-expression-in-label-free-shotgun/)
- [Mass Spectrometry Based Targeted Protein Quantification: Methods and Applications](https://scholariq.org/papers/mass-spectrometry-based-targeted-protein-quantification-methods-and-applications/)
- [Multi‐component immunoaffinity subtraction chromatography: An innovative step towards a comprehensive survey of the human plasma proteome](https://scholariq.org/papers/multi-component-immunoaffinity-subtraction-chromatography-an-innovative-step/)
- [Proteomic analysis of normal human urinary proteins isolated by acetone precipitation or ultracentrifugation](https://scholariq.org/papers/proteomic-analysis-of-normal-human-urinary-proteins-isolated-by-acetone/)
- [Proteome analysis of human colon cancer by two‐dimensional difference gel electrophoresis and mass spectrometry](https://scholariq.org/papers/proteome-analysis-of-human-colon-cancer-by-two-dimensional-difference-gel/)
- [Clinical proteomics: A need to define the field and to begin to set adequate standards](https://scholariq.org/papers/clinical-proteomics-a-need-to-define-the-field-and-to-begin-to-set-adequate/)
- [Urinary Proteomics in Diabetes and CKD](https://scholariq.org/papers/urinary-proteomics-in-diabetes-and-ckd/)

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Source: ScholarIQ — public research metadata, principally OpenAlex. See https://scholariq.org/sources/ for provenance and https://scholariq.org/methodology/ for what these figures mean.