# Gene expression and cancer classification

**Type:** Topics  
**Canonical URL:** https://scholariq.org/topics/gene-expression-and-cancer-classification/

## Facts

| Field | Value |
| --- | --- |
| Description | This cluster of papers focuses on the analysis of microarray data and gene expression profiling, covering topics such as normalization, differential expression, feature selection, machine learning applications, clustering methods, quality control, and bioinformatics tools. The papers discuss various techniques and methods for processing and interpreting gene expression data obtained from microarray experiments. |
| Domain | Life Sciences |
| Field | Biochemistry, Genetics and Molecular Biology |
| OpenAlex ID | t10885 |
| Works | 155 |

## Topic papers all

Showing 15 of 155.

- [Reproducible, interactive, scalable and extensible microbiome data science using QIIME 2](https://scholariq.org/papers/reproducible-interactive-scalable-and-extensible-microbiome-data-science-using/)
- [Robust enumeration of cell subsets from tissue expression profiles](https://scholariq.org/papers/robust-enumeration-of-cell-subsets-from-tissue-expression-profiles/)
- [Gene expression patterns of breast carcinomas distinguish tumor subclasses with clinical implications](https://scholariq.org/papers/gene-expression-patterns-of-breast-carcinomas-distinguish-tumor-subclasses-with/)
- [Significance analysis of microarrays applied to the ionizing radiation response](https://scholariq.org/papers/significance-analysis-of-microarrays-applied-to-the-ionizing-radiation-response/)
- [Statistical significance for genomewide studies](https://scholariq.org/papers/statistical-significance-for-genomewide-studies/)
- [Quantitative Monitoring of Gene Expression Patterns with a Complementary DNA Microarray](https://scholariq.org/papers/quantitative-monitoring-of-gene-expression-patterns-with-a-complementary-dna/)
- [The genomic and transcriptomic architecture of 2,000 breast tumours reveals novel subgroups](https://scholariq.org/papers/the-genomic-and-transcriptomic-architecture-of-2-000-breast-tumours-reveals/)
- [A reference panel of 64,976 haplotypes for genotype imputation](https://scholariq.org/papers/a-reference-panel-of-64-976-haplotypes-for-genotype-imputation/)
- [Mapping and analysis of chromatin state dynamics in nine human cell types](https://scholariq.org/papers/mapping-and-analysis-of-chromatin-state-dynamics-in-nine-human-cell-types/)
- [A cross-population atlas of genetic associations for 220 human phenotypes](https://scholariq.org/papers/a-cross-population-atlas-of-genetic-associations-for-220-human-phenotypes/)
- [Global Mapping of the Yeast Genetic Interaction Network](https://scholariq.org/papers/global-mapping-of-the-yeast-genetic-interaction-network/)
- [The clonal and mutational evolution spectrum of primary triple-negative breast cancers](https://scholariq.org/papers/the-clonal-and-mutational-evolution-spectrum-of-primary-triple-negative-breast/)
- [Assessment of Ki67 in Breast Cancer: Recommendations from the International Ki67 in Breast Cancer Working Group](https://scholariq.org/papers/assessment-of-ki67-in-breast-cancer-recommendations-from-the-international-ki67/)
- [PennCNV: An integrated hidden Markov model designed for high-resolution copy number variation detection in whole-genome SNP genotyping data](https://scholariq.org/papers/penncnv-an-integrated-hidden-markov-model-designed-for-high-resolution-copy/)
- [The molecular portraits of breast tumors are conserved across microarray platforms](https://scholariq.org/papers/the-molecular-portraits-of-breast-tumors-are-conserved-across-microarray/)

## Topic primary papers

Showing 15 of 43.

- [Robust enumeration of cell subsets from tissue expression profiles](https://scholariq.org/papers/robust-enumeration-of-cell-subsets-from-tissue-expression-profiles/)
- [Gene expression patterns of breast carcinomas distinguish tumor subclasses with clinical implications](https://scholariq.org/papers/gene-expression-patterns-of-breast-carcinomas-distinguish-tumor-subclasses-with/)
- [Significance analysis of microarrays applied to the ionizing radiation response](https://scholariq.org/papers/significance-analysis-of-microarrays-applied-to-the-ionizing-radiation-response/)
- [Statistical significance for genomewide studies](https://scholariq.org/papers/statistical-significance-for-genomewide-studies/)
- [Quantitative Monitoring of Gene Expression Patterns with a Complementary DNA Microarray](https://scholariq.org/papers/quantitative-monitoring-of-gene-expression-patterns-with-a-complementary-dna/)
- [A gene expression database for the molecular pharmacology of cancer](https://scholariq.org/papers/a-gene-expression-database-for-the-molecular-pharmacology-of-cancer/)
- [Molecular Classification and Molecular Forecasting of Breast Cancer: Ready for Clinical Application?](https://scholariq.org/papers/molecular-classification-and-molecular-forecasting-of-breast-cancer-ready-for/)
- [The MicroArray Quality Control (MAQC)-II study of common practices for the development and validation of microarray-based predictive models](https://scholariq.org/papers/the-microarray-quality-control-maqc-ii-study-of-common-practices-for-the/)
- [Analysis of gene expression profiles in normal and neoplastic ovarian tissue samples identifies candidate molecular markers of epithelial ovarian cancer](https://scholariq.org/papers/analysis-of-gene-expression-profiles-in-normal-and-neoplastic-ovarian-tissue/)
- [Performance comparison of one-color and two-color platforms within the Microarray Quality Control (MAQC) project](https://scholariq.org/papers/performance-comparison-of-one-color-and-two-color-platforms-within-the/)
- [Robustly detecting differential expression in RNA sequencing data using observation weights](https://scholariq.org/papers/robustly-detecting-differential-expression-in-rna-sequencing-data-using/)
- [Normalization strategies for cDNA microarrays](https://scholariq.org/papers/normalization-strategies-for-cdna-microarrays/)
- [An anatomic gene expression atlas of the adult mouse brain](https://scholariq.org/papers/an-anatomic-gene-expression-atlas-of-the-adult-mouse-brain/)
- [MSVM-RFE: extensions of SVM-RFE for multiclass gene selection on DNA microarray data](https://scholariq.org/papers/msvm-rfe-extensions-of-svm-rfe-for-multiclass-gene-selection-on-dna-microarray/)
- [Identification of toxicologically predictive gene sets using cDNA microarrays](https://scholariq.org/papers/identification-of-toxicologically-predictive-gene-sets-using-cdna-microarrays/)

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Source: ScholarIQ — public research metadata, principally OpenAlex. See https://scholariq.org/sources/ for provenance and https://scholariq.org/methodology/ for what these figures mean.