# Scientific Computing and Data Management

**Type:** Topics  
**Canonical URL:** https://scholariq.org/topics/scientific-computing-and-data-management/

## Facts

| Field | Value |
| --- | --- |
| Description | This cluster of papers focuses on the management, reproducibility, and provenance of scientific workflows, particularly in the fields of bioinformatics and computational research. It explores topics such as data provenance, workflow management systems, semantic web services, cyberinfrastructure, and software development for scientific applications. |
| Domain | Social Sciences |
| Field | Decision Sciences |
| OpenAlex ID | t11986 |
| Works | 50 |

## Topic papers all

Showing 15 of 50.

- [Bioconductor: open software development for computational biology and bioinformatics](https://scholariq.org/papers/bioconductor-open-software-development-for-computational-biology-and/)
- [A manifesto for reproducible science](https://scholariq.org/papers/a-manifesto-for-reproducible-science/)
- [Redefine statistical significance](https://scholariq.org/papers/redefine-statistical-significance/)
- [AmberTools](https://scholariq.org/papers/ambertools/)
- [XAI—Explainable artificial intelligence](https://scholariq.org/papers/xai-explainable-artificial-intelligence/)
- [The brain imaging data structure, a format for organizing and describing outputs of neuroimaging experiments](https://scholariq.org/papers/the-brain-imaging-data-structure-a-format-for-organizing-and-describing-outputs/)
- [QIIME 2: Reproducible, interactive, scalable, and extensible microbiome data science](https://scholariq.org/papers/qiime-2-reproducible-interactive-scalable-and-extensible-microbiome-data-science/)
- [Bioconductor: Open Software Development for Computational Biology and Bioinformatics](https://scholariq.org/papers/bioconductor-open-software-development-for-computational-biology-and-2/)
- [QIIME 2: Reproducible, interactive, scalable, and extensible microbiome data science](https://scholariq.org/papers/qiime-2-reproducible-interactive-scalable-and-extensible-microbiome-data-science-3/)
- [Living systematic reviews: 2. Combining human and machine effort](https://scholariq.org/papers/living-systematic-reviews-2-combining-human-and-machine-effort/)
- [Questionable research practices in ecology and evolution](https://scholariq.org/papers/questionable-research-practices-in-ecology-and-evolution/)
- [SPITFIRE: toward a semantic web of things](https://scholariq.org/papers/spitfire-toward-a-semantic-web-of-things/)
- [Computational physiology and the physiome project](https://scholariq.org/papers/computational-physiology-and-the-physiome-project/)
- [QIIME 2: Reproducible, interactive, scalable, and extensible microbiome data science](https://scholariq.org/papers/qiime-2-reproducible-interactive-scalable-and-extensible-microbiome-data-science-2/)
- [Cybermatics: Cyber–physical–social–thinking hyperspace based science and technology](https://scholariq.org/papers/cybermatics-cyber-physical-social-thinking-hyperspace-based-science-and/)

## Topic primary papers

Showing 15 of 19.

- [Bioconductor: open software development for computational biology and bioinformatics](https://scholariq.org/papers/bioconductor-open-software-development-for-computational-biology-and/)
- [The brain imaging data structure, a format for organizing and describing outputs of neuroimaging experiments](https://scholariq.org/papers/the-brain-imaging-data-structure-a-format-for-organizing-and-describing-outputs/)
- [QIIME 2: Reproducible, interactive, scalable, and extensible microbiome data science](https://scholariq.org/papers/qiime-2-reproducible-interactive-scalable-and-extensible-microbiome-data-science/)
- [Bioconductor: Open Software Development for Computational Biology and Bioinformatics](https://scholariq.org/papers/bioconductor-open-software-development-for-computational-biology-and-2/)
- [QIIME 2: Reproducible, interactive, scalable, and extensible microbiome data science](https://scholariq.org/papers/qiime-2-reproducible-interactive-scalable-and-extensible-microbiome-data-science-3/)
- [QIIME 2: Reproducible, interactive, scalable, and extensible microbiome data science](https://scholariq.org/papers/qiime-2-reproducible-interactive-scalable-and-extensible-microbiome-data-science-2/)
- [Cybermatics: Cyber–physical–social–thinking hyperspace based science and technology](https://scholariq.org/papers/cybermatics-cyber-physical-social-thinking-hyperspace-based-science-and/)
- [The multi-modal Australian ScienceS Imaging and Visualization Environment (MASSIVE) high performance computing infrastructure: applications in neuroscience and neuroinformatics research](https://scholariq.org/papers/the-multi-modal-australian-sciences-imaging-and-visualization-environment/)
- [Did awarding badges increase data sharing in<i>BMJ Open</i>? A randomized controlled trial](https://scholariq.org/papers/did-awarding-badges-increase-data-sharing-in-i-bmj-open-i-a-randomized/)
- [Big data management challenges in health research—a literature review](https://scholariq.org/papers/big-data-management-challenges-in-health-research-a-literature-review/)
- [Citizen science technologies and new opportunities for participation](https://scholariq.org/papers/citizen-science-technologies-and-new-opportunities-for-participation/)
- [Badges for sharing data and code at Biostatistics: an observational study](https://scholariq.org/papers/badges-for-sharing-data-and-code-at-biostatistics-an-observational-study-2/)
- [Badges for sharing data and code at Biostatistics: an observational study](https://scholariq.org/papers/badges-for-sharing-data-and-code-at-biostatistics-an-observational-study/)
- [rcrossref: Client for Various 'CrossRef' 'APIs'](https://scholariq.org/papers/rcrossref-client-for-various-crossref-apis/)
- [Data Interoperability in Context: The Importance of Open-Source Implementations When Choosing Open Standards](https://scholariq.org/papers/data-interoperability-in-context-the-importance-of-open-source-implementations-2/)

---
Source: ScholarIQ — public research metadata, principally OpenAlex. See https://scholariq.org/sources/ for provenance and https://scholariq.org/methodology/ for what these figures mean.