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Protein Structure and Dynamics

TopicLeading institutions, researchers & key papers

Protein Structure and Dynamics is a topic indexed in ScholarIQ from OpenAlex.

What is known about Protein Structure and Dynamics?

ScholarIQrecord summary

This cluster of papers focuses on the prediction and analysis of protein structures using methods such as molecular dynamics simulations, force fields, homology modeling, and circular dichroism. It also explores topics related to intrinsically disordered proteins, enzyme catalysis, and the effects of macromolecular crowding on protein behavior.

How many works does Protein Structure and Dynamics have?

ScholarIQindexed works

Protein Structure and Dynamics has 80 works in the ScholarIQ index. The count is the OpenAlex total, not the number of papers listed on this page.

What is the OpenAlex record for Protein Structure and Dynamics?

ScholarIQopenalex

The OpenAlex for Protein Structure and Dynamics is on the source record.

What are the most-cited papers on Protein Structure and Dynamics?

ScholarIQmost cited works
The Amber biomolecular simulation programs
David A. Case, Thomas E. Cheatham, Tom Darden, Holger Gohlke, Ray Luo, Kenneth M. Merz, Alexey V. Onufriev, Carlos Simmerling, Bing Wang, Robert J. Woods
Journal of Computational Chemistry. 20059,682 CitationsOPEN ACCESS
AmberTools
David A. Case, Hasan Metin Aktulga, Kellon Belfon, David S. Cerutti, G. Andrés Cisneros, Vinícius Wilian D. Cruzeiro, Negin Forouzesh, Timothy J. Giese, Andreas W. Götz, Holger Gohlke, Saeed Izadi, Koushik Kasavajhala, Mehmet Cagri Kaymak, Edward J. King, Tom Kurtzman, Tai‐Sung Lee, Pengfei Li, Jian Liu, Tyler Luchko, Ray Luo, Madushanka Manathunga, Matías Machado, Hai Nguyen, Kurt A. O’Hearn, Alexey V. Onufriev, Feng Pan, Sergio Pantano, Ruxi Qi, Ali Rahnamoun, Ali Risheh, Stephan Schott‐Verdugo, Akhil Shajan, Jason Swails, Junmei Wang, Haixin Wei, Xiongwu Wu, Yongxian Wu, Shi Zhang, Shiji Zhao, Qiang Zhu, Thomas E. Cheatham, Daniel R. Roe, Adrián E. Roitberg, Carlos Simmerling, Darrin M. York, Maria C. Nagan, Kenneth M. Merz
Journal of Chemical Information and Modeling. 20231,972 CitationsOPEN ACCESS
Recent Developments and Applications of the MMPBSA Method
Changhao Wang, D’Artagnan Greene, Li Xiao, Ruxi Qi, Ray Luo
Frontiers in Molecular Biosciences. 2018670 CitationsOPEN ACCESS
Characterization of the cytoplasm of Escherichia coli K-12 as a function of external osmolarity
Scott Cayley, Barbara Lewis, Harry J. Guttman, M. Thomas Record
Journal of Molecular Biology. 1991500 Citations
Critical assessment of protein intrinsic disorder prediction
Marco Necci, Damiano Piovesan, CAID Predictors, Md Tamjidul Hoque, Ian Walsh, Sumaiya Iqbal, Michele Vendruscolo, Pietro Sormanni, Chen Wang, Daniele Raimondi, Ronesh Sharma, Yaoqi Zhou, Thomas Litfin, Oxana V. Galzitskaya, Michail Yu. Lobanov, Wim Vranken, Björn Wallner, Claudio Mirabello, Nawar Malhis, Zsuzsanna Dosztányi, Gábor Erdős, Bálint Mészáros, Jianzhao Gao, Kui Wang, Gang Hu, Zhonghua Wu, Alok Sharma, Jack Hanson, K.K. Paliwal, Isabelle Callebaut, Tristan Bitard-Feildel, Gabriele Orlando, Zhenling Peng, Jinbo Xu, Sheng Wang, David T. Jones, Domenico Cozzetto, Fanchi Meng, Jing Yan, Jörg Gsponer, Jianlin Cheng, Tianqi Wu, Lukasz Kurgan, DisProt Curators, Vasilis J. Promponas, Stella Tamana, Cristina Marino‐Buslje, Elizabeth Martínez‐Pérez, Anastasia Chasapi, Christos Ouzounis, A. Keith Dunker, Andrey V. Kajava, Jérémy Leclercq, Burcu Aykaç Fas, Matteo Lambrughi, Emiliano Maiani, Elena Papaleo, Lucía B. Chemes, Lucía Álvarez, Nicolás S. González Foutel, Valentín Iglesias, Jordi Pujols, Salvador Ventura, Nicolás Palópoli, Guillermo Ignacio Benítez, Gustavo Parisi, Claudio Bassot, Arne Elofsson, Sudha Govindarajan, John Lamb, Marco Salvatore, András Hatos, Alexander Miguel Monzón, Martina Bevilacqua, Ivan Mičetić, Giovanni Minervini, Lisanna Paladin, Federica Quaglia, Emanuela Leonardi, Norman E. Davey, Tamás Horváth, Orsolya Panna Kovacs, Nikoletta Murvai, Rita Pancsa, Éva Schád, Beáta Szabó, Ágnes Tantos, Sandra Macedo‐Ribeiro, José A. Manso, Pedro José Barbosa Pereira, Radoslav Davidović, Nevena Veljković, Borbála Hajdu-Soltész, Mátyás Pajkos, Tamás Szaniszló, Mainak Guharoy, Tamás Lázár, Mauricio Macossay-Castillo, Péter Tompa, Silvio C. E. Tosatto
Nature Methods. 2021368 CitationsOPEN ACCESS

Where is Protein Structure and Dynamics research published, and who funds it?

ScholarIQvenues & funding sources

TOP FUNDERS

National Science Foundation—
NIH—
Wellcome Trust—
European Research Council—
Funder breakdown is a member featureSign up free to unlock

How much of the research on Protein Structure and Dynamics is open access?

ScholarIQopen access share
53%OPEN ACCESS
Gold
7%
Green
20%
Hybrid
27%
Bronze
0%
Closed
47%

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